Blogs

Knowledge resources for lab management and data analysis

mLIMS New Feature - Split Cages

Published by mLIMS @ July 30, 2024, 10:21 am

 

Quickly split  multiple animals in a cage to new or existing cages!  Find the split cage function in the cages menu.

 


Managing Strains in mLIMS Mouse Colony Management System

Published by mLIMS @ May 28, 2024, 1:35 pm

 

Learn about the improved workflow for managing strains in mLIMS Mouse Colony Management System.

Mouse Colony Software by BioInfoRx to improve your colony management workflow.

mLIMS Mouse Colony Management System

Mouse Colony Software in the Cloud

The leader in Animal Colony Management since 2005

 


New Features: mLIMS 2024

Published by mLIMS @ May 3, 2024, 9:33 am

There are several improvements in mLIMS For Researchers, mLIMS For Biotech, and mLIMS FacilityLearn more here!


BioInfoRx to Attend LAMA-ATA Meeting April 15-18

Published by Anne Gath @ April 11, 2024, 12:57 pm

BioInfoRx is an  Allied Trade Association member, and will participate and present at the 40th Annual Laboratory Animal Management Association conference in Fort Walton Beach, Florida. 


5 Tips for Robust and Reproducible scRNA-Seq Data Analysis

Published by BxGenomics @ September 24, 2023, 2:07 pm

BioInfoRx and Biogen have developed scRNASequest, an open-source ecosystem for scRNA-seq analysis, visualization, and publishing. To make this powerful pipeline more accessible, our team has introduced a fully supported and user-friendly version in BxGenomics, enabling academic and small biotech researchers to leverage its capabilities without the need for extensive IT and bioinformatics expertise. Here we shared some tips we learned from developing and running the pipeline on hundreds of scRNA-Seq experiments. 


RNA-Seq Case Study: Genes Regulated by p53-SET Interplay

Published by BxGenomics @ July 25, 2022, 9:18 pm

The oncoprotein SET can bind to p53 and inhibits p53 transcriptional activity in unstressed cells. To identify the genes regulated by SET in a p53-dependent manner, the endogenous SET was depleted by siRNA in control or p53 knockout U2OS cells. We use BxGenomics DEG and Venn Diagram tools to find genes regulated by p53-SET. 

Reference: Nature. 2016 Oct 6;538(7623):118-122. doi: 10.1038/nature19759.

 


RNA-Seq Case Study: iPSC Differentiation into Muscle and Neuron

Published by BxGenomics @ July 24, 2022, 11:12 am

We use BxGenomics to examine RNA-Seq data from three key time points during human iPSC differentiation into mature muscle fibers with motor neurons.  We can detect consistent genes changes as the cells differentiate, and myogenesis and nurogenesis genes are highly enriched in later time points.

Reference: Cells. 2020 Jun 23;9(6):1531. doi: 10.3390/cells9061531.

 


Ultimate Molecular Cloning Guides

Published by Ron @ July 1, 2022, 9:33 am
BxSeqTools

BxSeqTools Enables Gene Sequence Anaysis and Molecular Cloning in The Cloud

BxSeqTools is an integrated system allowing users to perform sequence analysis online, use your own data and resources, use public databases like GenBank, organize the results, and perform further molecular cloning work using built in bioinformatics tools. Everything is seamlessly integrated and readily available online.


mLIMS Release Notes in December, 2021

Published by mLIMS @ December 6, 2021, 1:27 pm
  • Improved Litter Survival  and Breeding Performance Reports
  • Improved Cage Usage Reports
  • Create Animal Tags
  • Customize the Strain Dropdown List
  • Create Forms (Premium Feature)

Learn more at https://mlims.com/help/what_s_new_in_mlims_2021.htm