Blogs

Knowledge resources for lab management and data analysis

ScaleSC: Supercharging Single Cell RNA-seq Analysis with GPU Power

Published by Susan @ March 5, 2025, 11:24 am
Single cell RNA sequencing(scRNA-seq) has transformed our understanding of cellular biology by allowing us to examine gene expression in individual cells. However, this powerful technology comes with a significant computational cost. In a revolutionary development for the single cell genomics community, Zhengyu Ouyang at BioInfoRx, along with researchers from Biogen, has introduced ScaleSC, a GPU-accelerated solution for single cell data processing (Hu et al., 2025). ScaleSC is freely available on GitHub, BioInfoRx also plans to integrate ScaleSC into the BxGenomics single-cell workflow.