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Venn Diagram

Data Extraction

Data Overlap

BxSeqTools

Venn Diagram

Plot area-proportional Venn diagrams based on values or computed overlaps

Data Extraction

Extract a subset of rows from a large table by matching multiple values

Data Overlap

Compute the overlap and unique items among multiple large datasets

Genomics Research Tool

Calculate Concentrations Using a Standard Curve

This program plots standard curve, calculates linear fitting equation and R2, and computes concentrations based on measurements and standard curve.

BxSeqTools

Manage, analyze, store and share DNA and oligo sequences online

BxMeetings

Online Lab Meeting and Collaboration Solutions. It is ready-to-use, reliable, secure, and free!



Real Examples and Publications

Here are some real-world examples of research publications using this tool:

Genomics/Microarray

Overlap between gene lists from different amplification conditions.		 Kang Y, et al. Transcript amplification from single bacterium for transcriptome analysis. Genome Res. 2011 Jun;21(6):925-35. PubMed PMID: 21536723

Genomics/Microarray

Compare two statistical methods to identify differentially expressed genes. 		Mougeot JL, et al. Microarray analysis of peripheral blood lymphocytes from ALS patients and the SAFE detection of the KEGG ALS pathway. BMC Med Genomics. 2011 Oct 25;4:74. PubMed PMID: 22027401

Proteomics

Overlap of peptides/proteins from S.aureus that were detected under two conditions.		 Miller M et al. Mapping of interactions between human macrophages and Staphylococcus aureus reveals an involvement of MAP kinase signaling in the host defense. J Proteome Res. 2011 Sep 2;10(9):4018-32. PubMed PMID: 21736355.

System Biology

Compare human and mouse protein networks.		 Feltes BC, et al. The developmental aging and origins of health and disease hypotheses explained by different protein networks. Biogerontology. 2011 Aug;12(4):293-308. PubMed PMID: 21380541.

Medical Study

Overlap for attendance of different health services by African women.		 Carlson M, et al. Who attends antenatal care and expanded programme on immunization services in Chad, Mali and Niger? The implications for insecticide-treated net delivery. Malar J. 2011 Nov 13;10:341. PubMed PMID: 22078175

Genomics/Microarray

Gene regulation in presence of hormone.		 Galliher-Beckley AJ, et al. Ligand-independent phosphorylation of the glucocorticoid receptor integrates cellular stress pathways with nuclear receptor signaling. Mol Cell Biol. 2011 Dec;31(23):4663-75. PubMed PMID: 21930780